Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS18725 | Not Available | Negative | 956348 - 956905 | 21314.0 |
| nad(p)-dependent oxidoreductase | BST98_RS18730 | Not Available | Positive | 957174 - 958007 | 29704.4 |
| nupc/nupg family nucleoside cnt transporter | BST98_RS18735 | Not Available | Negative | 958097 - 959314 | 42319.0 |
| hypothetical protein | BST98_RS18740 | Not Available | Positive | 959760 - 960329 | 20883.8 |
| gnat family n-acetyltransferase | BST98_RS18745 | Not Available | Positive | 961024 - 961572 | 20698.9 |
| duf1289 domain-containing protein | BST98_RS18750 | Not Available | Positive | 961671 - 961985 | 11896.5 |
| hypothetical protein | BST98_RS18755 | Not Available | Positive | 961982 - 963010 | 39652.6 |
| hypothetical protein | BST98_RS18760 | Not Available | Negative | 963115 - 963450 | 13037.8 |
| crea family protein | BST98_RS18765 | Not Available | Positive | 963656 - 964141 | 17271.7 |
| methyl-accepting chemotaxis protein | BST98_RS18770 | Not Available | Negative | 964199 - 965842 | 59991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

