Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BST98_RS18360 | Not Available | Negative | 860720 - 861787 | 40330.8 |
| tonb-dependent receptor family protein | BST98_RS18365 | Not Available | Negative | 861867 - 863858 | 74053.4 |
| glutathione binding-like protein | BST98_RS18370 | Not Available | Positive | 864140 - 864808 | 25619.7 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | BST98_RS18375 | Not Available | Negative | 864941 - 865342 | 15136.1 |
| mcrc family protein | BST98_RS18380 | Not Available | Negative | 865476 - 866777 | 49748.0 |
| aaa family atpase | BST98_RS18385 | Not Available | Negative | 866770 - 869232 | 94101.0 |
| condensin complex protein mkse | BST98_RS18390 | Not Available | Negative | 869452 - 870018 | 21989.9 |
| hypothetical protein | BST98_RS18395 | Not Available | Negative | 870015 - 871427 | 54406.3 |
| hypothetical protein | BST98_RS18400 | Not Available | Negative | 871420 - 874359 | 112597.0 |
| hypothetical protein | BST98_RS18405 | Not Available | Negative | 874363 - 875142 | 29982.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

