Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | BST98_RS18310 | Not Available | Positive | 850226 - 851992 | 66662.5 |
| response regulator transcription factor | BST98_RS18315 | Not Available | Positive | 851992 - 852642 | 24271.6 |
| dmso/selenate family reductase complex b subunit | BST98_RS18320 | Not Available | Positive | 852749 - 853372 | 23210.7 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | BST98_RS18325 | Not Available | Positive | 853375 - 854199 | 30948.2 |
| dmso/selenate family reductase complex a subunit | BST98_RS18330 | Not Available | Positive | 854225 - 856642 | 90689.4 |
| molecular chaperone | BST98_RS18335 | Not Available | Positive | 856707 - 857360 | 25996.3 |
| crp/fnr family transcriptional regulator | BST98_RS18340 | Not Available | Negative | 857484 - 858158 | 25470.3 |
| methyltransferase domain-containing protein | BST98_RS18345 | Not Available | Positive | 858353 - 859168 | 30696.8 |
| cupin domain-containing protein | BST98_RS18350 | Not Available | Positive | 859161 - 859484 | 12264.8 |
| rossmann-like domain-containing protein | BST98_RS18355 | Not Available | Positive | 859575 - 860600 | 37059.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

