Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | BST98_RS18110 | Not Available | Negative | 794708 - 795172 | 17481.8 |
| tetratricopeptide repeat protein | BST98_RS18115 | Not Available | Negative | 795290 - 796468 | 44523.0 |
| energy transducer tonb | BST98_RS18120 | Not Available | Negative | 796465 - 797121 | 23804.0 |
| exbd/tolr family protein | BST98_RS18125 | Not Available | Negative | 797138 - 797542 | 14686.6 |
| mota/tolq/exbb proton channel family protein | BST98_RS18130 | Not Available | Negative | 797539 - 798072 | 20011.8 |
| mota/tolq/exbb proton channel family protein | BST98_RS18135 | Not Available | Negative | 798072 - 799436 | 48940.2 |
| duf3450 domain-containing protein | BST98_RS18140 | Not Available | Negative | 799433 - 800221 | 29338.0 |
| tonb-dependent siderophore receptor | BST98_RS18145 | Not Available | Negative | 800335 - 802410 | 76501.3 |
| histidine kinase sensor domain-containing protein | BST98_RS18150 | Not Available | Negative | 802617 - 803987 | 51952.8 |
| hypothetical protein | BST98_RS18155 | Not Available | Positive | 804153 - 804785 | 23560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

