Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | BST98_RS18010 | Not Available | Negative | 767202 - 768680 | 54702.2 |
| iron-sulfur cluster assembly accessory protein | BST98_RS18015 | Not Available | Negative | 768684 - 769052 | 13384.9 |
| maltose abc transporter permease malg | BST98_RS18020 | Not Available | Negative | 769419 - 770309 | 32050.1 |
| maltose abc transporter permease malf | BST98_RS18025 | Not Available | Negative | 770321 - 771865 | 56802.9 |
| maltose/maltodextrin abc transporter substrate-binding protein male | BST98_RS18030 | Not Available | Negative | 771986 - 773167 | 42496.5 |
| maltose/maltodextrin abc transporter atp-binding protein malk | BST98_RS18035 | Not Available | Positive | 773597 - 774703 | 40890.5 |
| hypothetical protein | BST98_RS18040 | Not Available | Positive | 774980 - 775159 | 7198.2 |
| maltoporin | BST98_RS18045 | Not Available | Positive | 775790 - 777034 | 45262.4 |
| malm family protein | BST98_RS18050 | Not Available | Positive | 777137 - 777952 | 29319.9 |
| glycoside hydrolase family 36 protein | BST98_RS18055 | Not Available | Negative | 778061 - 779779 | 64546.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

