Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | BST98_RS01910 | Not Available | Positive | 381099 - 382358 | 45286.3 |
| cell division protein ftsz | BST98_RS01915 | Not Available | Positive | 382394 - 383542 | 40025.1 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | BST98_RS01920 | Not Available | Positive | 383817 - 384734 | 33869.6 |
| duf721 domain-containing protein | BST98_RS01925 | Not Available | Negative | 384840 - 385310 | 17364.0 |
| preprotein translocase subunit seca | BST98_RS01930 | Not Available | Positive | 385781 - 388501 | 103555.0 |
| 8-oxo-dgtp diphosphatase mutt | BST98_RS01935 | Not Available | Negative | 388641 - 389063 | 15493.2 |
| dna gyrase inhibitor yacg | BST98_RS01940 | Not Available | Negative | 389311 - 389520 | 7799.11 |
| cell division protein zapd | BST98_RS01945 | Not Available | Negative | 389529 - 390266 | 29079.1 |
| dephospho-coa kinase | BST98_RS01950 | Not Available | Negative | 390334 - 390936 | 22227.8 |
| prepilin peptidase | BST98_RS01955 | Not Available | Negative | 390938 - 391816 | 32604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

