Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS17860 | Not Available | Negative | 735692 - 736318 | 24266.2 |
| hypothetical protein | BST98_RS17865 | Not Available | Negative | 736332 - 736763 | 16213.0 |
| duf885 domain-containing protein | BST98_RS17870 | Not Available | Positive | 737529 - 739556 | 76304.8 |
| hypothetical protein | BST98_RS17875 | Not Available | Negative | 739906 - 740121 | 8311.79 |
| rok family protein | BST98_RS17880 | Not Available | Negative | 740343 - 741254 | 32316.1 |
| rod shape-determining protein roda | BST98_RS17885 | Not Available | Positive | 741530 - 742627 | 40186.1 |
| atpase | BST98_RS17890 | Not Available | Negative | 742699 - 742878 | 6784.27 |
| phospho-sugar mutase | BST98_RS17895 | Not Available | Negative | 742953 - 744659 | 62078.6 |
| duf2058 domain-containing protein | BST98_RS17900 | Not Available | Negative | 744985 - 745506 | 19360.3 |
| voc family protein | BST98_RS17905 | Not Available | Positive | 745680 - 746063 | 14825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

