Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BST98_RS17515 | Not Available | Positive | 661499 - 663520 | 74020.4 |
| nadph-dependent fmn reductase | BST98_RS17520 | Not Available | Negative | 663599 - 664126 | 19237.8 |
| sulfite exporter taue/safe family protein | BST98_RS17525 | Not Available | Negative | 664364 - 665152 | 27821.8 |
| fusc family protein | BST98_RS17530 | Not Available | Negative | 665281 - 667332 | 78293.9 |
| putative quinol monooxygenase | BST98_RS17535 | Not Available | Positive | 667618 - 667908 | 10786.9 |
| ybjq family protein | BST98_RS17540 | Not Available | Negative | 668137 - 668457 | 11383.7 |
| hypothetical protein | BST98_RS17545 | Not Available | Negative | 668485 - 668829 | 13115.5 |
| n-acetylmuramic acid 6-phosphate etherase | BST98_RS17550 | Not Available | Negative | 669022 - 669918 | 31271.9 |
| lytic transglycosylase f | BST98_RS17555 | Not Available | Positive | 670126 - 671577 | 55684.9 |
| phosphoethanolamine transferase | BST98_RS17560 | Not Available | Negative | 671637 - 673277 | 61966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

