Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | BST98_RS17465 | Not Available | Positive | 647253 - 648203 | 36183.8 |
| acetyl-coa c-acyltransferase fada | BST98_RS17470 | Not Available | Negative | 648342 - 649505 | 41305.1 |
| fatty acid oxidation complex subunit alpha fadb | BST98_RS17475 | Not Available | Negative | 649520 - 651667 | 78680.5 |
| acetyl-coa hydrolase/transferase family protein | BST98_RS17480 | Not Available | Negative | 651684 - 652991 | 46659.7 |
| helix-turn-helix domain-containing protein | BST98_RS17485 | Not Available | Positive | 653258 - 654289 | 39698.6 |
| mfs transporter | BST98_RS17490 | Not Available | Negative | 654325 - 655890 | 57412.1 |
| mfs transporter | BST98_RS17495 | Not Available | Negative | 655943 - 657580 | 57288.4 |
| amidohydrolase | BST98_RS17500 | Not Available | Negative | 657636 - 659303 | 62780.4 |
| hypothetical protein | BST98_RS17505 | Not Available | Negative | 659340 - 660170 | 30655.8 |
| lysr family transcriptional regulator | BST98_RS17510 | Not Available | Negative | 660287 - 661201 | 35068.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

