Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | BST98_RS17365 | Not Available | Positive | 627360 - 628718 | 49405.8 |
| amidohydrolase | BST98_RS17370 | Not Available | Positive | 628941 - 630338 | 50939.6 |
| aipr family protein | BST98_RS17375 | Not Available | Negative | 630870 - 632579 | 65944.6 |
| hypothetical protein | BST98_RS17380 | Not Available | Negative | 633452 - 633823 | 13709.3 |
| monooxygenase | BST98_RS17385 | Not Available | Negative | 633828 - 634136 | 11565.8 |
| lysr family transcriptional regulator | BST98_RS17390 | Not Available | Positive | 634246 - 635139 | 32782.6 |
| hypothetical protein | BST98_RS17395 | Not Available | Positive | 635223 - 635741 | 19403.8 |
| gnat family n-acetyltransferase | BST98_RS17400 | Not Available | Negative | 635831 - 636337 | 18431.9 |
| methyltransferase family protein | BST98_RS17405 | Not Available | Negative | 636408 - 636866 | 17816.6 |
| alpha/beta fold hydrolase | BST98_RS17410 | Not Available | Negative | 636979 - 637791 | 30080.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

