Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1097 domain-containing protein | BST98_RS17315 | Not Available | Negative | 618327 - 618809 | 17022.2 |
| duf4344 domain-containing metallopeptidase | BST98_RS17320 | Not Available | Negative | 618965 - 619735 | 29114.1 |
| beta-n-acetylhexosaminidase | BST98_RS17325 | Not Available | Positive | 619949 - 620953 | 36899.1 |
| cation diffusion facilitator family transporter | BST98_RS17330 | Not Available | Negative | 621411 - 622328 | 34151.3 |
| hypothetical protein | BST98_RS17335 | Not Available | Negative | 622643 - 623095 | 17194.2 |
| l,d-transpeptidase family protein | BST98_RS17340 | Not Available | Negative | 623243 - 624145 | 32971.6 |
| hypothetical protein | BST98_RS17345 | Not Available | Negative | 624330 - 624800 | 18341.1 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | BST98_RS17350 | Not Available | Positive | 624939 - 625928 | 37273.6 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | BST98_RS17355 | Not Available | Positive | 625928 - 626548 | 23813.4 |
| hypothetical protein | BST98_RS17360 | Not Available | Positive | 626653 - 627270 | 24149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

