Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | BST98_RS01860 | Not Available | Positive | 368807 - 369130 | 12112.8 |
| penicillin-binding transpeptidase domain-containing protein | BST98_RS01865 | Not Available | Positive | 369133 - 370863 | 63041.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BST98_RS01870 | Not Available | Positive | 370888 - 372405 | 53999.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BST98_RS01875 | Not Available | Positive | 372402 - 373784 | 48981.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BST98_RS01880 | Not Available | Positive | 373781 - 374863 | 40260.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BST98_RS01885 | Not Available | Positive | 374867 - 376210 | 47668.0 |
| cell division protein ftsw | BST98_RS01890 | Not Available | Positive | 376204 - 377508 | 47915.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BST98_RS01895 | Not Available | Positive | 377495 - 378559 | 37902.1 |
| udp-n-acetylmuramate--l-alanine ligase | BST98_RS01900 | Not Available | Positive | 378575 - 380035 | 52730.2 |
| cell division protein ftsq/divib | BST98_RS01905 | Not Available | Positive | 380308 - 381099 | 29992.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

