Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BST98_RS17110 | Not Available | Positive | 570712 - 571365 | 23595.3 |
| bifunctional metallophosphatase/5'-nucleotidase | BST98_RS17115 | Not Available | Negative | 571509 - 573269 | 64260.7 |
| voc family protein | BST98_RS17120 | Not Available | Negative | 573638 - 574033 | 15157.9 |
| duf2813 domain-containing protein | BST98_RS17125 | Not Available | Positive | 574241 - 575941 | 65768.2 |
| duf3833 domain-containing protein | BST98_RS17130 | Not Available | Negative | 575964 - 576572 | 23362.9 |
| chalcone isomerase family protein | BST98_RS17135 | Not Available | Negative | 576576 - 577085 | 19970.8 |
| duf2878 domain-containing protein | BST98_RS17140 | Not Available | Negative | 577112 - 577654 | 20495.0 |
| sam-dependent methyltransferase | BST98_RS17145 | Not Available | Negative | 577691 - 578941 | 47721.9 |
| duf1365 domain-containing protein | BST98_RS17150 | Not Available | Negative | 578961 - 579839 | 34496.7 |
| nad(p)/fad-dependent oxidoreductase | BST98_RS17155 | Not Available | Negative | 579839 - 581146 | 49943.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

