Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | BST98_RS17060 | Not Available | Negative | 560197 - 560715 | 19935.6 |
| yoah family protein | BST98_RS17065 | Not Available | Negative | 560944 - 561093 | 5390.36 |
| nnrs family protein | BST98_RS17070 | Not Available | Negative | 561177 - 562379 | 45174.3 |
| duf2861 family protein | BST98_RS17075 | Not Available | Negative | 562647 - 563513 | 32863.2 |
| response regulator transcription factor | BST98_RS17080 | Not Available | Negative | 563518 - 564177 | 24677.7 |
| sensor histidine kinase vxra | BST98_RS17085 | Not Available | Negative | 564152 - 565594 | 55070.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | BST98_RS17090 | Not Available | Negative | 565785 - 567161 | 48513.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | BST98_RS17095 | Not Available | Negative | 567172 - 568728 | 54897.4 |
| hlyu family transcriptional regulator | BST98_RS17100 | Not Available | Negative | 569273 - 569554 | 10605.9 |
| hypothetical protein | BST98_RS17105 | Not Available | Negative | 569645 - 569836 | 7252.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

