Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | BST98_RS16860 | Not Available | Negative | 520860 - 521810 | 33471.1 |
| ydbl family protein | BST98_RS16865 | Not Available | Negative | 521973 - 522296 | 11751.2 |
| ynbe family lipoprotein | BST98_RS16870 | Not Available | Negative | 522314 - 522529 | 7905.77 |
| ydbh domain-containing protein | BST98_RS16875 | Not Available | Negative | 522605 - 525895 | 124560.0 |
| hypothetical protein | BST98_RS16880 | Not Available | Negative | 526148 - 526477 | 12037.6 |
| bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferase | BST98_RS16885 | Not Available | Negative | 526842 - 529541 | 99288.9 |
| duf2301 domain-containing membrane protein | BST98_RS16890 | Not Available | Negative | 529664 - 530173 | 18814.3 |
| spor domain-containing protein | BST98_RS16895 | Not Available | Positive | 530353 - 530940 | 21165.2 |
| sugar o-acetyltransferase | BST98_RS16900 | Not Available | Positive | 531117 - 531671 | 20215.2 |
| d-alanine--d-alanine ligase | BST98_RS16905 | Not Available | Positive | 531875 - 532867 | 36711.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

