Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BST98_RS16720 | Not Available | Positive | 495680 - 496141 | 17736.3 |
| hypothetical protein | BST98_RS22375 | Not Available | Negative | 496214 - 496387 | 6561.8 |
| hypothetical protein | BST98_RS16725 | Not Available | Positive | 496605 - 497003 | 15207.4 |
| hypothetical protein | BST98_RS16730 | Not Available | Positive | 497132 - 497380 | 9512.56 |
| dass family sodium-coupled anion symporter | BST98_RS16735 | Not Available | Positive | 497600 - 499021 | 50588.6 |
| hypothetical protein | BST98_RS16740 | Not Available | Negative | 499087 - 499374 | 11085.0 |
| hypothetical protein | BST98_RS16745 | Not Available | Negative | 499410 - 500417 | 39477.8 |
| hypothetical protein | BST98_RS16750 | Not Available | Positive | 500786 - 501052 | 10167.8 |
| enoyl-coa hydratase/isomerase family protein | BST98_RS16755 | Not Available | Positive | 501196 - 502338 | 42388.4 |
| sdr family oxidoreductase | BST98_RS16760 | Not Available | Positive | 502359 - 503117 | 27306.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

