Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BST98_RS16620 | Not Available | Negative | 468510 - 469676 | 41343.2 |
| cytochrome b/b6 domain-containing protein | BST98_RS16625 | Not Available | Positive | 470240 - 470809 | 21548.8 |
| serine hydrolase domain-containing protein | BST98_RS16630 | Not Available | Negative | 470896 - 472218 | 49518.8 |
| molybdate abc transporter permease subunit | BST98_RS16635 | Not Available | Positive | 472555 - 473244 | 24991.4 |
| molybdenum abc transporter atp-binding protein modc | BST98_RS16640 | Not Available | Positive | 473244 - 474338 | 40830.6 |
| duf2955 domain-containing protein | BST98_RS16645 | Not Available | Negative | 474483 - 475508 | 37631.9 |
| hlyd family secretion protein | BST98_RS16650 | Not Available | Negative | 475533 - 476600 | 39515.0 |
| lysr family transcriptional regulator | BST98_RS16655 | Not Available | Positive | 476704 - 477582 | 32960.4 |
| hypothetical protein | BST98_RS16660 | Not Available | Negative | 477639 - 477911 | 10078.7 |
| yfcc family protein | BST98_RS16665 | Not Available | Positive | 478411 - 479943 | 55609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

