Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS16570 | Not Available | Positive | 460259 - 460579 | 11799.0 |
| duf6162 family protein | BST98_RS16575 | Not Available | Positive | 460576 - 461175 | 22566.4 |
| metal abc transporter solute-binding protein, zn/mn family | BST98_RS16580 | Not Available | Positive | 461188 - 462111 | 34008.1 |
| metal abc transporter atp-binding protein | BST98_RS16585 | Not Available | Positive | 462111 - 462902 | 29178.2 |
| metal abc transporter permease | BST98_RS16590 | Not Available | Positive | 462902 - 463777 | 31264.0 |
| metal abc transporter solute-binding protein, zn/mn family | BST98_RS16595 | Not Available | Positive | 463781 - 464689 | 33843.8 |
| ydch family protein | BST98_RS16600 | Not Available | Positive | 464927 - 465172 | 9450.14 |
| class i sam-dependent dna methyltransferase | BST98_RS16605 | Not Available | Negative | 465253 - 465996 | 28550.5 |
| duf2541 family protein | BST98_RS16610 | Not Available | Positive | 466384 - 466773 | 14772.9 |
| phosphoethanolamine transferase | BST98_RS16615 | Not Available | Positive | 466981 - 468438 | 55304.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

