Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | BST98_RS16520 | Not Available | Negative | 447570 - 449465 | 68313.8 |
| hsp20 family protein | BST98_RS16525 | Not Available | Negative | 449606 - 450028 | 16055.0 |
| efflux rnd transporter periplasmic adaptor subunit | BST98_RS16530 | Not Available | Positive | 450546 - 451781 | 45567.0 |
| efflux rnd transporter permease subunit | BST98_RS16535 | Not Available | Positive | 451778 - 454891 | 115885.0 |
| duf2076 family protein | BST98_RS16540 | Not Available | Negative | 454961 - 455761 | 28222.2 |
| eal domain-containing protein | BST98_RS16545 | Not Available | Positive | 456235 - 457092 | 32725.2 |
| glutathione-dependent disulfide-bond oxidoreductase | BST98_RS16550 | Not Available | Positive | 457227 - 458084 | 32106.2 |
| pepsy-associated tm helix domain-containing protein | BST98_RS16555 | Not Available | Positive | 458223 - 458849 | 23506.7 |
| duf2271 domain-containing protein | BST98_RS16560 | Not Available | Positive | 458870 - 459388 | 19861.4 |
| duf4198 domain-containing protein | BST98_RS16565 | Not Available | Positive | 459412 - 460248 | 31096.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

