Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-binding protein | BST98_RS16055 | Not Available | Negative | 353278 - 354756 | 54291.5 |
| ompa family protein | BST98_RS16060 | Not Available | Positive | 355145 - 356152 | 36876.6 |
| haloacid dehalogenase type ii | BST98_RS16280 | Not Available | Positive | 403199 - 403888 | 25196.1 |
| atp-binding protein | BST98_RS16285 | Not Available | Positive | 404220 - 406175 | 73967.0 |
| hypothetical protein | BST98_RS22365 | Not Available | Positive | 406469 - 406624 | 6158.49 |
| hypothetical protein | BST98_RS16290 | Not Available | Positive | 406793 - 407434 | 23427.6 |
| nucleotidyl transferase abieii/abigii toxin family protein | BST98_RS16295 | Not Available | Negative | 407618 - 408367 | 29062.4 |
| hypothetical protein | BST98_RS16300 | Not Available | Negative | 408339 - 408551 | 8376.17 |
| rha family transcriptional regulator | BST98_RS16305 | Not Available | Negative | 408904 - 409497 | 21907.5 |
| hypothetical protein | BST98_RS16310 | Not Available | Positive | 409986 - 410405 | 16101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

