Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | BST98_RS01760 | Not Available | Positive | 350340 - 351596 | 44147.5 |
| outer membrane-stress sensor serine endopeptidase degs | BST98_RS01765 | Not Available | Negative | 351703 - 352818 | 39644.0 |
| do family serine endopeptidase | BST98_RS01770 | Not Available | Negative | 352966 - 354333 | 48067.3 |
| z-ring associated protein zapg | BST98_RS01775 | Not Available | Negative | 354447 - 354908 | 17122.1 |
| cell division protein zape | BST98_RS01780 | Not Available | Positive | 355064 - 356167 | 42952.7 |
| 50s ribosomal protein l13 | BST98_RS01785 | Not Available | Positive | 356436 - 356864 | 15853.5 |
| 30s ribosomal protein s9 | BST98_RS01790 | Not Available | Positive | 356880 - 357272 | 14798.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | BST98_RS01795 | Not Available | Positive | 357687 - 358280 | 21138.2 |
| cytochrome b | BST98_RS01800 | Not Available | Positive | 358280 - 359545 | 48124.6 |
| cytochrome c1 | BST98_RS01805 | Not Available | Positive | 359542 - 360279 | 27907.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

