Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter atp-binding protein rbsa | BST98_RS15900 | Not Available | Negative | 319435 - 320940 | 54798.6 |
| d-ribose pyranase | BST98_RS15905 | Not Available | Negative | 321000 - 321419 | 15172.4 |
| tobe domain-containing protein | BST98_RS15915 | Not Available | Negative | 322042 - 322845 | 28852.9 |
| nad-dependent malic enzyme | BST98_RS15920 | Not Available | Positive | 323145 - 324860 | 63716.1 |
| pyrimidine-specific ribonucleoside hydrolase riha | BST98_RS15925 | Not Available | Negative | 324967 - 325905 | 34039.0 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | BST98_RS15930 | Not Available | Positive | 326235 - 326993 | 27373.4 |
| carbamate kinase | BST98_RS15935 | Not Available | Negative | 327771 - 328700 | 33302.8 |
| vc0807 family protein | BST98_RS15940 | Not Available | Positive | 329192 - 329878 | 25474.8 |
| vanz family protein | BST98_RS15945 | Not Available | Negative | 329909 - 330271 | 13525.0 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | BST98_RS15950 | Not Available | Negative | 330412 - 332859 | 90189.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

