Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BST98_RS15800 | Not Available | Negative | 297034 - 297939 | 34964.1 |
| alkyl/aryl-sulfatase | BST98_RS15805 | Not Available | Negative | 298047 - 300002 | 73026.7 |
| elyc/sana/ydcf family protein | BST98_RS15810 | Not Available | Negative | 300122 - 301102 | 37305.5 |
| spfh domain-containing protein | BST98_RS15815 | Not Available | Positive | 301386 - 302306 | 33384.6 |
| nfed family protein | BST98_RS15820 | Not Available | Positive | 302309 - 302758 | 16890.9 |
| low-specificity l-threonine aldolase | BST98_RS15825 | Not Available | Negative | 302852 - 303856 | 36239.4 |
| mmcq/yjbr family dna-binding protein | BST98_RS15830 | Not Available | Positive | 303982 - 304353 | 14093.4 |
| hypothetical protein | BST98_RS15835 | Not Available | Negative | 304392 - 304658 | 9748.26 |
| cytosolic protein | BST98_RS15840 | Not Available | Negative | 304921 - 305259 | 12434.7 |
| hypothetical protein | BST98_RS15845 | Not Available | Positive | 305814 - 306035 | 8124.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

