Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide oxidoreductase dcc family protein | BST98_RS15700 | Not Available | Negative | 271082 - 271471 | 15180.2 |
| hypothetical protein | BST98_RS15705 | Not Available | Negative | 271573 - 272334 | 28916.6 |
| pyroglutamyl-peptidase i | BST98_RS15710 | Not Available | Negative | 272498 - 273136 | 22714.1 |
| putative basic amino acid antiporter yfcc | BST98_RS15715 | Not Available | Positive | 273507 - 275051 | 55207.2 |
| succinylglutamate desuccinylase/aspartoacylase family protein | BST98_RS15720 | Not Available | Positive | 275126 - 276139 | 37553.9 |
| molybdopterin-dependent oxidoreductase | BST98_RS15725 | Not Available | Positive | 276467 - 279133 | 98546.4 |
| dead/deah box helicase | BST98_RS15730 | Not Available | Positive | 279233 - 280516 | 47693.1 |
| lysr family transcriptional regulator | BST98_RS15735 | Not Available | Positive | 280695 - 281597 | 34828.1 |
| sulfite exporter taue/safe family protein | BST98_RS15740 | Not Available | Positive | 281854 - 282585 | 26260.4 |
| cytochrome-c oxidase, cbb3-type subunit iii | BST98_RS15745 | Not Available | Negative | 282590 - 284794 | 81195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

