Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfkb family carbohydrate kinase | BST98_RS15650 | Not Available | Negative | 259529 - 260485 | 34633.5 |
| purine-cytosine permease family protein | BST98_RS15655 | Not Available | Negative | 260485 - 261882 | 49503.0 |
| adp-ribosylglycohydrolase family protein | BST98_RS15660 | Not Available | Negative | 261895 - 262929 | 37007.0 |
| gntr family transcriptional regulator | BST98_RS15665 | Not Available | Positive | 263080 - 263817 | 27444.7 |
| mfs transporter | BST98_RS15670 | Not Available | Positive | 264393 - 265859 | 54140.3 |
| potassium transporter kup | BST98_RS15675 | Not Available | Positive | 266116 - 267978 | 68989.8 |
| atp-binding protein | BST98_RS15680 | Not Available | Positive | 268046 - 269512 | 54572.0 |
| response regulator | BST98_RS15685 | Not Available | Positive | 269505 - 270200 | 26097.7 |
| hypothetical protein | BST98_RS15690 | Not Available | Positive | 270308 - 270586 | 10566.0 |
| twin-arginine translocase tata/tate family subunit | BST98_RS15695 | Not Available | Positive | 270628 - 270846 | 7899.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

