Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | BST98_RS15555 | Not Available | Positive | 238326 - 239489 | 43080.6 |
| arac family transcriptional regulator | BST98_RS15560 | Not Available | Negative | 239515 - 240282 | 29260.3 |
| mfs transporter | BST98_RS15565 | Not Available | Positive | 240391 - 241533 | 41348.9 |
| hypothetical protein | BST98_RS15570 | Not Available | Positive | 241681 - 241956 | 10034.5 |
| hypothetical protein | BST98_RS15575 | Not Available | Negative | 242080 - 242598 | 20580.1 |
| glutathione peroxidase | BST98_RS15580 | Not Available | Positive | 242696 - 243172 | 17570.0 |
| phospholipase d family protein | BST98_RS15585 | Not Available | Negative | 243248 - 244795 | 57832.5 |
| hypothetical protein | BST98_RS15590 | Not Available | Negative | 244986 - 246005 | 37474.1 |
| hypothetical protein | BST98_RS15595 | Not Available | Positive | 246364 - 246612 | 9339.06 |
| l-asparaginase 2 | BST98_RS15600 | Not Available | Positive | 246874 - 247938 | 37981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

