Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | BST98_RS01710 | Not Available | Negative | 343458 - 344021 | 21149.9 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | BST98_RS01715 | Not Available | Negative | 344018 - 344575 | 20420.6 |
| kpsf/gutq family sugar-phosphate isomerase | BST98_RS01720 | Not Available | Negative | 344575 - 345543 | 34382.2 |
| calcium/sodium antiporter | BST98_RS01725 | Not Available | Negative | 345560 - 346525 | 33772.7 |
| phospholipid abc transporter atp-binding protein mlaf | BST98_RS01730 | Not Available | Positive | 346968 - 347780 | 29325.4 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | BST98_RS01735 | Not Available | Positive | 347809 - 348591 | 27929.0 |
| outer membrane lipid asymmetry maintenance protein mlad | BST98_RS01740 | Not Available | Positive | 348617 - 349096 | 17098.7 |
| phospholipid-binding protein mlac | BST98_RS01745 | Not Available | Positive | 349106 - 349741 | 24008.2 |
| lipid asymmetry maintenance protein mlab | BST98_RS01750 | Not Available | Positive | 349744 - 350055 | 11688.1 |
| bola family iron metabolism protein ibag | BST98_RS01755 | Not Available | Positive | 350075 - 350329 | 9341.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

