Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | BST98_RS15510 | Not Available | Positive | 228539 - 229051 | 18925.2 |
| protein disulfide oxidoreductase | BST98_RS15515 | Not Available | Negative | 229170 - 229685 | 19454.9 |
| protein-disulfide reductase dsbd family protein | BST98_RS15520 | Not Available | Negative | 229689 - 231746 | 74729.0 |
| hypothetical protein | BST98_RS15525 | Not Available | Negative | 231843 - 232217 | 14336.6 |
| flavohemoglobin expression-modulating qegla motif protein | BST98_RS15530 | Not Available | Negative | 232382 - 234364 | 75736.7 |
| glutathione synthase | BST98_RS15535 | Not Available | Negative | 234348 - 235376 | 38308.3 |
| duf413 domain-containing protein | BST98_RS15540 | Not Available | Negative | 235496 - 235846 | 13229.2 |
| hth-type transcriptional regulator hdfr | BST98_RS15545 | Not Available | Positive | 236038 - 236907 | 32562.0 |
| hypothetical protein | BST98_RS22455 | Not Available | Positive | 237121 - 237291 | 6816.74 |
| duf2799 domain-containing protein | BST98_RS15550 | Not Available | Positive | 237702 - 238253 | 21380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

