Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BST98_RS15460 | Not Available | Negative | 215584 - 216687 | 42188.1 |
| anaerobic ribonucleoside-triphosphate reductase | BST98_RS15465 | Not Available | Positive | 217014 - 219152 | 79952.6 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | BST98_RS15470 | Not Available | Positive | 219245 - 219721 | 17964.2 |
| geved domain-containing protein | BST98_RS15475 | Not Available | Negative | 219814 - 222408 | 91692.9 |
| eal domain-containing protein | BST98_RS15480 | Not Available | Positive | 222874 - 224895 | 75238.4 |
| duf2960 domain-containing protein | BST98_RS15485 | Not Available | Positive | 224967 - 225230 | 10003.0 |
| nucleotide pyrophosphohydrolase | BST98_RS15490 | Not Available | Negative | 225277 - 225624 | 13228.6 |
| eama family transporter rard | BST98_RS15495 | Not Available | Negative | 225658 - 226566 | 33395.1 |
| duf2750 domain-containing protein | BST98_RS15500 | Not Available | Positive | 226863 - 227216 | 13381.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | BST98_RS15505 | Not Available | Negative | 227283 - 228038 | 28885.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

