Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS15355 | Not Available | Positive | 135254 - 135589 | 12584.2 |
| aspartate-semialdehyde dehydrogenase | BST98_RS15360 | Not Available | Negative | 135682 - 136818 | 41594.3 |
| lysine-sensitive aspartokinase 3 | BST98_RS15365 | Not Available | Negative | 136975 - 138324 | 48917.8 |
| mate family efflux transporter | BST98_RS15375 | Not Available | Positive | 139392 - 142202 | 101616.0 |
| carboxynorspermidine synthase | BST98_RS15380 | Not Available | Positive | 142319 - 143575 | 46509.4 |
| carboxynorspermidine decarboxylase | BST98_RS15385 | Not Available | Positive | 143646 - 144770 | 41100.0 |
| duf2750 domain-containing protein | BST98_RS15390 | Not Available | Negative | 145016 - 145408 | 15095.6 |
| geved domain-containing protein | BST98_RS15395 | Not Available | Positive | 145682 - 167362 | 754880.0 |
| geved domain-containing protein | BST98_RS15400 | Not Available | Positive | 167549 - 179278 | 410147.0 |
| geved domain-containing protein | BST98_RS15405 | Not Available | Positive | 179531 - 188365 | 310834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

