Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22525 | Not Available | Negative | 128028 - 128192 | 6377.55 |
| substrate-binding domain-containing protein | BST98_RS15310 | Not Available | Negative | 128549 - 129547 | 36196.2 |
| duf2975 domain-containing protein | BST98_RS15315 | Not Available | Positive | 129854 - 130402 | 20882.9 |
| helix-turn-helix domain-containing protein | BST98_RS15320 | Not Available | Positive | 130412 - 130639 | 8392.29 |
| glutathione synthase | BST98_RS15325 | Not Available | Positive | 130837 - 132279 | 53411.0 |
| hypothetical protein | BST98_RS15330 | Not Available | Positive | 132374 - 132691 | 11743.9 |
| Trna-asp | Not Available | Not Available | Positive | 132754 - 132830 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 132874 - 132964 | Not Available |
| phosphoribosylglycinamide formyltransferase | BST98_RS15345 | Not Available | Negative | 133093 - 133884 | 29891.8 |
| hypothetical protein | BST98_RS15350 | Not Available | Negative | 134212 - 135003 | 29633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

