Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | BST98_RS15110 | Not Available | Positive | 85502 - 86116 | 23503.2 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | BST98_RS15115 | Not Available | Positive | 86122 - 88086 | 71572.9 |
| galactosyl transferase | BST98_RS15120 | Not Available | Positive | 88197 - 89888 | 64517.9 |
| nudix hydrolase | BST98_RS15125 | Not Available | Positive | 90007 - 90546 | 20591.4 |
| duf3820 family protein | BST98_RS15130 | Not Available | Positive | 90550 - 90765 | 8180.18 |
| leucine-rich repeat domain-containing protein | BST98_RS15135 | Not Available | Positive | 90776 - 91264 | 18290.8 |
| hypothetical protein | BST98_RS15140 | Not Available | Negative | 91339 - 91719 | 14352.2 |
| dead/deah box helicase | BST98_RS15145 | Not Available | Negative | 91874 - 93169 | 47573.4 |
| hypothetical protein | BST98_RS22615 | Not Available | Positive | 93450 - 93581 | 4850.62 |
| hypothetical protein | BST98_RS15155 | Not Available | Positive | 94862 - 95263 | 15323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

