Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS15060 | Not Available | Positive | 76636 - 77118 | 17751.4 |
| nickel/cobalt transporter | BST98_RS15065 | Not Available | Negative | 77174 - 78265 | 38673.5 |
| duf1007 family protein | BST98_RS15070 | Not Available | Negative | 78288 - 78923 | 24040.7 |
| marr family winged helix-turn-helix transcriptional regulator | BST98_RS15075 | Not Available | Negative | 79170 - 79625 | 17197.2 |
| duf2955 domain-containing protein | BST98_RS15080 | Not Available | Negative | 79597 - 80616 | 38133.8 |
| hlyd family secretion protein | BST98_RS15085 | Not Available | Negative | 80629 - 81678 | 38289.5 |
| trna (pseudouridine(54)-n(1))-methyltransferase trmy | BST98_RS15090 | Not Available | Positive | 81819 - 82418 | 22263.9 |
| gnat family n-acetyltransferase | BST98_RS15095 | Not Available | Positive | 82441 - 82923 | 18182.4 |
| gfo/idh/moca family protein | BST98_RS15100 | Not Available | Negative | 83063 - 84049 | 36606.4 |
| iron-containing alcohol dehydrogenase | BST98_RS15105 | Not Available | Negative | 84071 - 85219 | 41607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

