Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | BST98_RS14910 | Not Available | Positive | 40793 - 41791 | 37291.3 |
| alpha/beta fold hydrolase | BST98_RS14915 | Not Available | Positive | 41798 - 42769 | 37723.9 |
| hypothetical protein | BST98_RS14920 | Not Available | Negative | 42857 - 43726 | 32542.2 |
| hypothetical protein | BST98_RS14925 | Not Available | Positive | 43931 - 44719 | 28782.7 |
| thioredoxin trxc | BST98_RS14930 | Not Available | Negative | 44806 - 45240 | 16020.2 |
| hypothetical protein | BST98_RS14935 | Not Available | Negative | 45511 - 45708 | 7458.73 |
| Trna-ser | Not Available | Not Available | Positive | 46129 - 46219 | Not Available |
| rida family protein | BST98_RS14945 | Not Available | Positive | 46680 - 47945 | 45264.1 |
| ggdef domain-containing protein | BST98_RS14950 | Not Available | Positive | 48340 - 49992 | 63772.4 |
| gh92 family glycosyl hydrolase | BST98_RS14955 | Not Available | Positive | 50232 - 52628 | 89104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

