Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | BST98_RS14765 | Not Available | Negative | 5728 - 6960 | 46785.4 |
| helix-turn-helix domain-containing protein | BST98_RS14770 | Not Available | Positive | 7641 - 8567 | 35205.5 |
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | BST98_RS14775 | Not Available | Negative | 8673 - 9599 | 33886.1 |
| m17 family metallopeptidase | BST98_RS14780 | Not Available | Negative | 9614 - 10987 | 49882.6 |
| abc transporter permease | BST98_RS14785 | Not Available | Negative | 11003 - 12025 | 36663.2 |
| abc transporter permease | BST98_RS14790 | Not Available | Negative | 12028 - 13014 | 36621.6 |
| abc transporter substrate-binding protein | BST98_RS14795 | Not Available | Negative | 13104 - 14720 | 61448.3 |
| beta-mannosidase | BST98_RS14800 | Not Available | Negative | 15020 - 17524 | 96482.8 |
| helix-turn-helix transcriptional regulator | BST98_RS14805 | Not Available | Negative | 17753 - 18595 | 32649.8 |
| pts fructose-like transporter subunit iib | BST98_RS14810 | Not Available | Negative | 18903 - 19217 | 11141.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

