Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS17820 | Not Available | Positive | 728210 - 728569 | 13813.4 |
| Putative phage recombination protein | BST98_RS17825 | Not Available | Positive | 728636 - 729493 | 32205.2 |
| Hypothetical protein | BST98_RS17830 | Not Available | Positive | 729490 - 731061 | 59220.7 |
| hypothetical protein | BST98_RS17835 | Not Available | Positive | 731076 - 731333 | 10013.0 |
| Hypothetical protein | BST98_RS17840 | Not Available | Positive | 731758 - 732996 | 46620.4 |
| Putative excisionase | BST98_RS17845 | Not Available | Positive | 733024 - 733257 | 9121.06 |
| Attr | Not Available | Not Available | Positive | 733027 - 733038 | Not Available |
| Putative bacteriophage integrase | BST98_RS17850 | Not Available | Positive | 733257 - 734531 | 48517.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | BST98_RS14755 | Not Available | Positive | 3276 - 5480 | 82498.6 |
| Trna-pro | Not Available | Not Available | Positive | 5482 - 5558 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

