Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS17710 | Not Available | Negative | 715455 - 715820 | 14246.5 |
| Putative lysozyme | BST98_RS17715 | Not Available | Negative | 715810 - 716355 | 20364.2 |
| Hypothetical protein | BST98_RS17720 | Not Available | Negative | 716345 - 716590 | 8625.6 |
| hypothetical protein | BST98_RS17725 | Not Available | Negative | 716658 - 717353 | 26555.9 |
| tigr02642 family protein | BST98_RS17730 | Not Available | Negative | 717410 - 718216 | 30761.1 |
| Orf076 | BST98_RS17735 | Not Available | Positive | 718428 - 718634 | 7622.73 |
| dmt family transporter | BST98_RS17745 | Not Available | Positive | 719105 - 720028 | 34424.4 |
| gfo/idh/moca family protein | BST98_RS17750 | Not Available | Positive | 720016 - 720993 | 36731.8 |
| Protein of unknown function (duf1364) | BST98_RS17755 | Not Available | Negative | 721035 - 721355 | 12061.5 |
| yagu family protein | BST98_RS17760 | Not Available | Negative | 721765 - 722388 | 23518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

