Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS17660 | Not Available | Negative | 705417 - 706037 | 23821.5 |
| Hypothetical protein | BST98_RS17665 | Not Available | Negative | 706037 - 706618 | 21865.1 |
| Hypothetical protein | BST98_RS17670 | Not Available | Negative | 706621 - 707049 | 16140.5 |
| Hypothetical protein | BST98_RS17675 | Not Available | Negative | 707106 - 707486 | 13138.4 |
| Putative major capsid protein | BST98_RS17680 | Not Available | Negative | 707505 - 708716 | 45136.6 |
| Hypothetical protein | BST98_RS17685 | Not Available | Negative | 708782 - 709783 | 37357.6 |
| Putative portal protein | BST98_RS17690 | Not Available | Negative | 710424 - 712508 | 79392.6 |
| Terminase large subunit | BST98_RS17695 | Not Available | Negative | 712508 - 714172 | 63492.2 |
| Terminase small subunit | BST98_RS17700 | Not Available | Negative | 714165 - 714983 | 30889.2 |
| hypothetical protein | BST98_RS22385 | Not Available | Negative | 714993 - 715166 | 6339.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

