Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mshp protein | BST98_RS01610 | Not Available | Positive | 319362 - 319787 | 15737.0 |
| duf6701 domain-containing protein | BST98_RS01615 | Not Available | Positive | 319787 - 323752 | 147716.0 |
| rod shape-determining protein mreb | BST98_RS01620 | Not Available | Positive | 324112 - 325155 | 36958.5 |
| rod shape-determining protein mrec | BST98_RS01625 | Not Available | Positive | 325197 - 326159 | 35432.9 |
| rod shape-determining protein mred | BST98_RS01630 | Not Available | Positive | 326149 - 326637 | 18752.7 |
| maf family protein | BST98_RS01635 | Not Available | Positive | 326708 - 327289 | 21485.6 |
| ribonuclease g | BST98_RS01640 | Not Available | Positive | 327298 - 328767 | 55269.4 |
| yhdp family protein | BST98_RS01645 | Not Available | Positive | 328781 - 332665 | 143004.0 |
| carbon-nitrogen hydrolase family protein | BST98_RS01650 | Not Available | Positive | 332693 - 333514 | 30563.7 |
| metalloprotease tldd | BST98_RS01655 | Not Available | Positive | 333527 - 334975 | 51126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

