Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS16240 | Not Available | Positive | 389684 - 390358 | 24326.1 |
| Hypothetical protein | BST98_RS16245 | Not Available | Positive | 390369 - 390737 | 13574.0 |
| Hypothetical protein | BST98_RS16250 | Not Available | Positive | 390737 - 390976 | 8112.74 |
| Hypothetical protein | BST98_RS16255 | Not Available | Positive | 390989 - 392299 | 49816.3 |
| Paps reductase | BST98_RS16260 | Not Available | Positive | 392413 - 393624 | 48124.8 |
| Co-activator of prophage gene expression | BST98_RS16265 | Not Available | Positive | 393624 - 394265 | 24224.9 |
| hypothetical protein | BST98_RS22360 | Not Available | Positive | 394749 - 394910 | 5870.08 |
| Hypothetical protein | BST98_RS16275 | Not Available | Positive | 395060 - 403078 | 295024.0 |
| Attr | Not Available | Not Available | Positive | 414278 - 414290 | Not Available |
| Attl | Not Available | Not Available | Positive | 674601 - 674612 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

