Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BST98_RS16190 | Not Available | Positive | 378605 - 379615 | 36673.4 |
| Putative major capsid protein | BST98_RS16195 | Not Available | Positive | 379675 - 380904 | 45539.2 |
| Hypothetical protein | BST98_RS16200 | Not Available | Positive | 380917 - 381300 | 13557.5 |
| Hypothetical protein | BST98_RS16205 | Not Available | Positive | 381363 - 381827 | 17574.9 |
| Hypothetical protein | BST98_RS16210 | Not Available | Positive | 381833 - 382414 | 22042.7 |
| Hypothetical protein | BST98_RS16215 | Not Available | Positive | 382414 - 383034 | 23614.2 |
| Putative tail fiber protein | BST98_RS16220 | Not Available | Positive | 383039 - 386065 | 108062.0 |
| Hypothetical protein | BST98_RS16225 | Not Available | Positive | 386083 - 387684 | 58936.2 |
| Putative tail tip fiber protein | BST98_RS16230 | Not Available | Positive | 387684 - 389255 | 56786.0 |
| Hypothetical protein | BST98_RS16235 | Not Available | Positive | 389280 - 389681 | 15344.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

