Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Predicted transposase | BST98_RS16150 | Not Available | Positive | 370591 - 371541 | 36636.1 |
| Is150 transposase b | BST98_RS16155 | Not Available | Positive | 371588 - 371689 | 3989.87 |
| hypothetical protein | BST98_RS16160 | Not Available | Positive | 372079 - 372333 | 9135.12 |
| Putative lysozyme | BST98_RS16165 | Not Available | Positive | 372326 - 372871 | 20252.2 |
| hypothetical protein | BST98_RS16170 | Not Available | Positive | 372858 - 373223 | 13816.9 |
| Hypothetical protein | BST98_RS22355 | Not Available | Positive | 373243 - 373419 | 6625.03 |
| Attr | Not Available | Not Available | Positive | 373749 - 373760 | Not Available |
| Putative large subunit terminase | BST98_RS16175 | Not Available | Positive | 374096 - 375835 | 65054.6 |
| Portal protein | BST98_RS16180 | Not Available | Positive | 375859 - 377946 | 78816.1 |
| hypothetical protein | BST98_RS16185 | Not Available | Positive | 377957 - 378274 | 11881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

