Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 356192 - 356204 | Not Available |
| Integrase | BST98_RS16065 | Not Available | Negative | 356289 - 357257 | 36682.3 |
| Repressor protein c | BST98_RS16070 | Not Available | Negative | 357300 - 357590 | 10833.1 |
| hypothetical protein | BST98_RS16075 | Not Available | Positive | 357694 - 357945 | 9494.57 |
| hypothetical protein | BST98_RS16080 | Not Available | Positive | 357976 - 358239 | 9827.64 |
| hypothetical protein | BST98_RS22340 | Not Available | Positive | 358350 - 358601 | 9841.25 |
| hypothetical protein | BST98_RS16085 | Not Available | Positive | 358659 - 358901 | 9397.5 |
| hypothetical protein | BST98_RS16090 | Not Available | Positive | 358906 - 359313 | 15340.2 |
| hypothetical protein | BST98_RS16095 | Not Available | Positive | 359370 - 359780 | 15087.8 |
| marr family transcriptional regulator | BST98_RS16100 | Not Available | Positive | 359780 - 360625 | 31342.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

