Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22185 | Not Available | Positive | 300740 - 301123 | 14208.2 |
| hypothetical protein | BST98_RS22630 | Not Available | Positive | 301132 - 301257 | 4612.9 |
| hypothetical protein | BST98_RS22435 | Not Available | Positive | 301272 - 301448 | 6174.53 |
| hypothetical protein | BST98_RS22190 | Not Available | Negative | 301557 - 301961 | 15136.0 |
| hypothetical protein | BST98_RS22195 | Not Available | Positive | 302343 - 302798 | 18110.4 |
| hypothetical protein | BST98_RS22200 | Not Available | Positive | 302802 - 303077 | 10243.2 |
| hypothetical protein | BST98_RS22440 | Not Available | Positive | 303150 - 304136 | 38119.8 |
| h-ns family nucleoid-associated regulatory protein | BST98_RS22210 | Not Available | Positive | 304684 - 305133 | 17292.8 |
| tyrosine-type recombinase/integrase | BST98_RS22215 | Not Available | Negative | 305909 - 307213 | 50171.8 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | BST98_RS22220 | Not Available | Negative | 307501 - 308472 | 37208.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

