Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bleomycin binding protein | BST98_RS22075 | Not Available | Positive | 280055 - 280441 | 14481.1 |
| pyridoxamine 5'-phosphate oxidase family protein | BST98_RS22080 | Not Available | Negative | 280761 - 281153 | 14726.5 |
| is6-like element is26 family transposase | BST98_RS22085 | Not Available | Negative | 281488 - 282192 | 27953.9 |
| chemotaxis protein | BST98_RS22090 | Not Available | Positive | 282256 - 282483 | 8144.41 |
| hypothetical protein | BST98_RS22095 | Not Available | Negative | 283193 - 283486 | 11396.6 |
| hypothetical protein | BST98_RS22100 | Not Available | Negative | 283798 - 284034 | 8733.22 |
| lipase family protein | BST98_RS22105 | Not Available | Negative | 284255 - 285139 | 32728.5 |
| hypothetical protein | BST98_RS22115 | Not Available | Positive | 286121 - 286489 | 14505.3 |
| paar domain-containing protein | BST98_RS22120 | Not Available | Positive | 286683 - 287951 | 48410.2 |
| tetratricopeptide repeat protein | BST98_RS22125 | Not Available | Negative | 288356 - 289363 | 39586.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

