Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21910 | Not Available | Negative | 236821 - 237177 | 12803.3 |
| eal domain-containing protein | BST98_RS21915 | Not Available | Positive | 237352 - 238668 | 49494.3 |
| gamma-mobile-trio recombinase gmty | BST98_RS21920 | Not Available | Positive | 238872 - 240347 | 56012.1 |
| vpa1269 family protein | BST98_RS21925 | Not Available | Positive | 240344 - 242935 | 100223.0 |
| gamma-mobile-trio protein gmtx | BST98_RS21930 | Not Available | Positive | 242925 - 243575 | 24455.3 |
| hypothetical protein | BST98_RS21935 | Not Available | Positive | 243934 - 244719 | 29192.1 |
| recombinase family protein | BST98_RS21940 | Not Available | Negative | 244948 - 245496 | 20002.1 |
| hypothetical protein | BST98_RS21945 | Not Available | Positive | 245628 - 246335 | 27271.4 |
| hypothetical protein | BST98_RS21950 | Not Available | Positive | 246419 - 247126 | 27178.6 |
| tn3 family transposase | BST98_RS21955 | Not Available | Negative | 247614 - 250640 | 116473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

