Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein tral | BST98_RS21795 | Not Available | Negative | 213038 - 213334 | 11582.5 |
| hypothetical protein | BST98_RS21800 | Not Available | Negative | 213438 - 213830 | 13535.9 |
| duf4400 domain-containing protein | BST98_RS21805 | Not Available | Negative | 214020 - 214655 | 24354.3 |
| conjugative transfer system coupling protein trad | BST98_RS21810 | Not Available | Negative | 214659 - 216533 | 70136.6 |
| mobh family relaxase | BST98_RS21815 | Not Available | Negative | 216530 - 219451 | 109097.0 |
| hypothetical protein | BST98_RS21820 | Not Available | Negative | 219460 - 220164 | 26361.5 |
| conjugative transfer protein mobi(a/c) | BST98_RS21825 | Not Available | Negative | 220166 - 220693 | 20385.3 |
| hypothetical protein | BST98_RS21830 | Not Available | Positive | 220953 - 221306 | 12834.7 |
| hypothetical protein | BST98_RS21835 | Not Available | Positive | 221319 - 221846 | 20239.2 |
| conjugal transfer protein traf | BST98_RS21840 | Not Available | Positive | 221939 - 222979 | 39510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

