Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21745 | Not Available | Negative | 201356 - 201997 | 24668.2 |
| hypothetical protein | BST98_RS21750 | Not Available | Negative | 203166 - 203948 | 30277.6 |
| trac family protein | BST98_RS21755 | Not Available | Negative | 204068 - 206686 | 100114.0 |
| trav family lipoprotein | BST98_RS21760 | Not Available | Negative | 206686 - 207348 | 24700.2 |
| hypothetical protein | BST98_RS21765 | Not Available | Negative | 207351 - 208193 | 31424.3 |
| hypothetical protein | BST98_RS21770 | Not Available | Negative | 208566 - 209003 | 15535.5 |
| hypothetical protein | BST98_RS21775 | Not Available | Negative | 209078 - 209506 | 15934.5 |
| trab/virb10 family protein | BST98_RS21780 | Not Available | Negative | 209509 - 210924 | 51028.9 |
| type-f conjugative transfer system secretin trak | BST98_RS21785 | Not Available | Negative | 210927 - 212342 | 51622.7 |
| trae/trak family type iv conjugative transfer system protein | BST98_RS21790 | Not Available | Negative | 212344 - 213030 | 25431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

