Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21645 | Not Available | Positive | 181982 - 182218 | 8753.39 |
| dna polymerase iii subunit beta | BST98_RS21650 | Not Available | Positive | 182731 - 183882 | 42319.9 |
| hypothetical protein | BST98_RS21655 | Not Available | Positive | 184003 - 184332 | 12126.7 |
| hypothetical protein | BST98_RS21660 | Not Available | Positive | 184446 - 185072 | 23702.2 |
| plasmid segregation protein parm domain-containing protein | BST98_RS21665 | Not Available | Positive | 185834 - 186796 | 35010.6 |
| hypothetical protein | BST98_RS21670 | Not Available | Positive | 186808 - 187344 | 20165.0 |
| hypothetical protein | BST98_RS21675 | Not Available | Negative | 187447 - 188397 | 35790.0 |
| hypothetical protein | BST98_RS21680 | Not Available | Positive | 188601 - 189188 | 22317.5 |
| hnh endonuclease | BST98_RS21685 | Not Available | Negative | 189263 - 189997 | 27782.1 |
| hypothetical protein | BST98_RS21690 | Not Available | Negative | 190052 - 190591 | 20500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

