Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS21590 | Not Available | Positive | 167723 - 168031 | 11700.7 |
| hypothetical protein | BST98_RS21600 | Not Available | Negative | 168627 - 168836 | 7521.7 |
| hypothetical protein | BST98_RS21605 | Not Available | Negative | 168984 - 169673 | 26377.5 |
| pd-(d/e)xk nuclease-like domain-containing protein | BST98_RS21610 | Not Available | Positive | 169932 - 171170 | 46667.8 |
| ig-like domain-containing protein | BST98_RS21615 | Not Available | Positive | 171801 - 174218 | 90100.2 |
| ig-like domain-containing protein | BST98_RS21620 | Not Available | Positive | 174391 - 176793 | 89119.0 |
| repb family plasmid replication initiator protein | BST98_RS21625 | Not Available | Negative | 176833 - 177876 | 40050.9 |
| coiled-coil domain-containing protein | BST98_RS21630 | Not Available | Negative | 178766 - 180055 | 48186.6 |
| hypothetical protein | BST98_RS21635 | Not Available | Positive | 180211 - 181395 | 45675.2 |
| hypothetical protein | BST98_RS21640 | Not Available | Positive | 181382 - 181726 | 12879.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

